Protein : RUNX2

Name RUNX2
Description runt-related transcription factor 2
Owner Public
URN urn:agi-llid:860
Connectivity 91
Notes This gene is a member of the RUNX family of transcription factors and encodes a nuclear protein with an Runt DNA-binding domain. This protein is essential for osteoblastic differentiation and skeletal morphogenesis, acting as a scaffold for nucleic acids and regulatory factors involved in skeletal gene expression. The protein can bind DNA both as a monomer or, with more affinity, as a subunit of a heterodimeric complex. Mutations in this gene have been associated with the bone development disorder cleidocranial dysplasia (CCD). Transcript variants, encoding different protein isoforms, result from alternate promoter use as well as alternate splicing. 4 new genes may be under the control of Cbfa1; 3 of them, SelM, elF-4AI, & RPS24, seemed to be linked to a global change in cellular metabolism & cell growth; the CD99/MIC2 gene was strongly overexpressed in cells presenting high levels of Deltacbfa1. Analysis of the three-dimensional structure of the DNA binding runt domain of the RUNX2 protein and its interaction with DNA provide insight into how missense mutations affect RUNX2 function and cause cleidocranial dysplasia. As a target gene of endostatin, cbfa1/osf2 was found to be specifically expressed in granulocytes in human breast neoplasms. Capability of Imatinib to induce an anti-leukemic effect in Core Binding Factor (CBF)-leukemia patients. Cbfa1 is a key regulatory factor in the vascular calcification observed in dialysis patients and is up-regulated in response to many uremic toxins. Cbfa1 is required in mediating the bone anabolic effects of parathyroid hormone. Cleidocranial dysplasia (CCD) is an inherited autosomal-dominant skeletal disease caused by heterozygous mutations in the RUNX2 protein. Cleidocranial dysplasia could result from much smaller losses in the RUNX2 function than has been envisioned on the basis of the conventional haploinsufficiency model. Differential regulation of Cbfa1/Runx2 and osteocalcin gene expression by vitamin-D3, dexamethasone, and local growth factors in primary human osteoblasts. Expression of Runx2 in prostate cancer may be the molecular switch that is associated with expression of various bone-specific factors in prostate cancer. Fidelity of Runx2 intranuclear organization is necessary for expression of target genes that mediate the osteolytic activity of metastatic breast cancer cells. Growth hormone attenuates the transcriptional activity of Runx2 by facilitating its physical association with Stat3beta. Osteocalcin mRNA was down-regulated in Apert osteoblasts carrying the FGFR2 P253R mutation, Runt-related transcription factor-2 (RUNX2) mRNA was differentially spliced, and FGF2 secretion was greater. PLZF plays important roles in early osteoblastic differentiation as an upstream regulator of CBFA1. Physiologic coupling of osteoblast differentiation to cell cycle withdrawal is mediated through runx2 and p27KIP1, and these processes are disrupted in osteosarcoma. RT-PCR analysis of human bone marrow stromal cells during osteogenesis in vitro: the mRNA levels of bone morphogenetic protein-2 (BMP-2), bone sialoprotein-II (BSP), osteopontin (OP) and cbfa-1 increased with culture time in osteogenic medium. RUNX1 and RUNX2 regulate TIMP1 gene expression. RUNX2 DNA binding is regulated by IGF-1 through sequential activation of the PI3K/Pak1 and ERK1/2 signaling cascade. RUNX2 is negatively regulated by the phosphorylation of two conserved serines. Runx2 collaborates with Oct-1 and contributes to the expression of a mammary gland-specific gene. Runx2 expression in breast cancer cells provides a molecular phenotype that enables the interactions between tumor cells and the bone microenvironment that lead to osteolytic disease. Runx2 expression in osteoblasts is reduced by hypoxia, and may be a mechanism of osteoporosis by decreased vascular supply. Runx2 has a role in menin-induced bone morphogenetic protein 2- and transforming growth factor beta-regulated osteoblastic differentiation. Runx2 has a role in parathyroid hormone-induced anti-apoptotic signaling in osteoblasts, which is shortened by proteasomal degradation. Runx2 is ectopically expressed in breast cancer cells and that one isoform of Runx2 can activate bsp expression in these cells. Runx2/Cbfa1 activity increases through a posttranslational mechanism involving phosphorylation of key residues and has a role in osteoblastic differentiation. TWIST inactivation reduces expression and DNA binding to the osteocalcin promoter in osteoblasts. Telomerase accelerates osteogenesis of bone marrow stromal stem cells by upregulation of CBFA1, osterix, and osteocalcin. The regulation of SOST expression by Cbfa1 suggests a potential role for the sclerosteosis gene in homeostatic regulation of osteoblast differentiation and function. This protein is regulated by human basic fibroblast growth factor. Clavicular dysplasia was more pronounced with the R19OW mutation, while the bone density was markedly reduced in individuals with either R19OW or deletion of nucleotide C821. Is an essential transcription factor for the regulation of osteoblast differentiation. Mechanical stress plays a key role in the progression of OPLL through an increase in Cbfa1 expression. Regulatory signals are active at transcriptional subnuclear sites. Six novel mutations causing 2 amino acid substitutions and four frameshift mutations were identified in the RUNX2 gene of Italian cleidocranial dysplasia patients. Variants may be related to genetic effects on bone mineral density and osteoporosis.
Hugo ID 10472

Microarray ID A_43_P16039
A_43_P16081
1425389_a_at
92677_s_at
A_52_P460545
A_51_P230942
A_52_P415319
A_65_P18181
216994_s_at
221283_at
236858_s_at
236859_at
34502_g_at
34501_at
73682_at
221282_x_at
39187_at
L40992_at
A_23_P418986
A_14_P112328
A_14_P105070
A_24_P69267
A_14_P119973
OR2460
OH5838

GenBank ID 51830603
AAC78626
AAD01649
AAF22568
AAF73290
AB013129
AF005936
AF010284
AF020681
AF053948
AF053951
AF053954
AF053955
AF053956
AF134836
AF155360
AK089291
AK134925
AK158925
AK162373
AK164454
BAA03485
BAA03486
BAA85345
BAA85346
D14636
D14637
NC_000083
NM_009820
NP_033950
NT_039655
Q08775
CAI19925
CAI19926
AAC78625
AB025797
AB115745
AB115746
AF053950
AF053953
BAB40441
BAD08305
BAD08306
NC_005108
NW_047813
Q9Z2J9
XM_346016
XP_346017
CAI19931
CAI19932
L40992
NC_000006
NM_001015051
NM_001024630
NM_004348
NP_001015051
NP_001019801
NP_004339
NT_007592
NT_086693
Q13950
AAC77442
AAB65409
AAB82419
AAC77440
AAC78623
AAA89072
AAB65158
AAB65159
AAC77441
AAC78624
AF001443
AF001444
AF001445
AF001446
AF001447
AF001448
AF001449
AF001450
AF053949
AF053952
AF087960
AL096865
AL161907
AL358135
AY406695
CAI13528
CAI13529
CAI13531
CAI13532
CAI19637
CAI19638
CAI19639
CAI19641
20806529
20806530
6063417
6063419
3873193
3873194
6652981
6652982
8132437
8132439
2580611
2580612
2293471
2293472
3901257
3901258
3901263
3901264
3901265
3901266
26105184
391766
391767
391768
391769
17368427
AH005498
51465675
10863884
10863885
51465701
2245515
5724787
2245516
2245517
2245518
2245519
2245520
2245521
2245522
2290720
3873195
3873196
9581792
56203971
56203972
56203978
11229073
56205903
56205904
56205907
12666263
55959062
55959063
55959066
3901259
3901260
735897
735898
17368460
34875263
34874764
34874765
3873197
3873198
13516444
13516445
41349750
41349751
41349752
41349753
3901261
3901262

Chromosome position 9q12
6p21
17 28.07 cM

GO ID 0045667
0001501
0001649
0003677
0003682
0005737
0040036
0042475
0042487
0045944
0048469
0001503
0003700
0003702
0005515
0005524
0005634
0006350
0006355

Alias CCD
Cbf
LS3
LS-3
LS 3
LS(3)
CBFA1
OSF2
PEBP2A1
PEBP2A2
PEBP2aA
PEBP2aA1
Pebpa2a
runt domain, alpha subunit 1
RUNX2
core-binding factor, runt domain, alpha subunit
runt domain, alpha subunit
AML3
CCD1
core-binding factor, runt domain, alpha subunit 1
runt-related transcription factor II
core-binding factor, runt domain, alpha subunit I
cleidocranial dysplasia I
CCD I
cleidocranial dysplasia 1
runt-related transcription factor 2
AKV core binding factor
polyomavirus enhancer binding factor 2 (PEBP2)
SL3-3 enhancer factor 1
SL3-3 enhancer factor I
CBFA I
PEBP2A I
runt domain, alpha subunit I
PEBP2 alpha A
PEBP2aA I

Organism Rattus norvegicus
Homo sapiens
Mus musculus

MedLine Reference 12434156
12807883
14688224
15107406
15136142
15225881
15389629
15537544
15557274
15565649
9651525
12145306
9182762
9182764
9182765

LocusLink ID 12393
84606
367218
29494
860

FunctionalClass DNA binding
chromatin binding
ATP binding
RNA polymerase II transcription factor
protein binding
transcription factor

RGD ID 2282

Hugo Symbol RUNX2

Unigene ID Hs.122116
Mm.4509
Rn.136298

GO Cellular Component nucleus
cytoplasm

Cell Localization Nucleus

Pathway IGF1R -> RUNX2 signalling pathway
IL1R1 -> RUNX2 signalling pathway
FGFR1 -> RUNX2 signalling pathway
FGFR2 -> RUNX2 signalling pathway
BMP2-ACVR1
BMP2-ACVR2
BMP2-BMPR1A
BMP2-BMPR1B
BMP2-BMPR2
BMP4-ACVR1
BMP4-BMPR1A
BMP4-BMPR1B
BMP4-BMPR2
BMP7-ACVR1
BMP7-ACVR2
BMP7-ACVR2B
BMP7-BMPR1A
BMP7-BMPR1B
BMP7-BMPR2
EGF-ERBB2
EGF-ERBB3
EGF-ERBB4
EGF-LRP8
EGF-NGFR
FGF2-CD44
FGF2-FGFR1
FGF2-FGFR2
FGF2-FGFR3
FGF2-GPC1
FGF2-TGFBR3
FGF4-CD44
FGF4-FGFR2
FGF8-CD44
FGF8-FGFR2
FGF8-FGFR3
IFNG-HLA-C
IFNG-IFNGR1
IFNG-IFNGR2
IGF1-BST1
IGF1-IGF2R
IGF1-LRP5
PTH-IL6ST
SPP1-CD44
SPP1-ITGAV
TGFB1-ACVR1
TGFB1-ACVR1B
TGFB1-ACVR2
TGFB1-ACVR2B
TGFB1-ACVRL1
TGFB1-BMPR1B
TGFB1-CD44
TGFB1-IGF2R
TGFB1-IL6R
TGFB1-M6PR
TGFB1-SELE
TGFB1-SELL
TGFB1-TGFBR1
TGFB1-TGFBR2
TGFB1-TGFBR3
TNFSF11-TNFRSF11A
TNFSF11-TNFRSF11B
PPAR all
PPARgamma
ERalpha

GO Biological Process regulation of osteoblast differentiation
ossification
regulation of transcription, DNA-dependent
transcription
cell maturation
odontogenesis (sensu Vertebrata)
osteoblast differentiation
positive regulation of transcription from RNA polymerase II promoter
regulation of fibroblast growth factor receptor signaling pathway
regulation of odontogenesis (sensu Vertebrata)
skeletal development
positive regulation of transcription from Pol II promoter

Group Transcription factors

MGI ID 99829

Swiss-Prot Accession Q13950

OMIM ID 600211
119600

Source Curated